PPDB

The Plant Proteome Database

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AT5G06530.1   ABC-2 type transporter family protein

Lab Annot. ABC-2 type transporter protein
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06530.2 11Arabidopsis thaliana07511001002 (2)_
AT5G06530.3 11Arabidopsis thaliana069198992 (2)_
AT3G52310.1 11Arabidopsis thaliana075168800 (0)C
Os03g06139.1 7Oryza sativa068273830 (0)_
Os11g07600.1 7Oryza sativa2E-17062942610 (0)_
Os06g40550.1 7Oryza sativa1E-16764344590 (0)_
Zm00001eb004340_P001 agpv5Zea mays046075850 (0)_
v1_GRMZM2G028070_P01 4a53Zea mays074668780 (0)_
Zm00001eb004340_P002 agpv5Zea mays074667780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_25(1) AAA_28(1) AAA_29(1) AAA_30(1)
TargetP: Cytoplasm (Class 3 C0.124; M0.154; S0.006; _0.604)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 751 aa (-cTP 663)
Molecular Weight 82.93 kDA(-cTP )
PI 9.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help