PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G06500.1   AGAMOUS-like 96

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40210.1 11Arabidopsis thaliana8E-3226329480 (0)_
AT2G28700.1 11Arabidopsis thaliana3E-2114035580 (0)M
AT3G05860.2 11Arabidopsis thaliana2E-1918030510 (0)_
Os03g38610.1 7Oryza sativa4E-1512533540 (0)_
Os01g18440.1 7Oryza sativa7E-1410036630 (0)_
Os01g18420.1 7Oryza sativa7E-1316328490 (0)_
GRMZM5G853066_P01 3.21Zea mays3E-1813935540 (0)M
Zm00001eb219630_P001 agpv5Zea mays3E-1813935540 (0)M
v1_GRMZM2G035836_P01 4a53Zea mays1E-1713536550 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SRF-TF(1)
TargetP: Mitochondria (Class 3 C0.152; M0.726; S0.019; _0.250)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 242 aa (-cTP 235)
Molecular Weight 27.30 kDA(-cTP )
PI 5.06(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help