PPDB

PPDB	The Plant Proteome Database

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AT5G06490.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G35910.1 11 Arabidopsis thaliana 1E-46 185 49 63 0 (0) _
AT3G61550.1 11 Arabidopsis thaliana 3E-31 179 36 55 0 (0) _
AT5G07040.1 11 Arabidopsis thaliana 6E-29 169 37 53 0 (0) S
Os03g57410.1 7 Oryza sativa 1E-33 186 45 62 0 (0) _
Os07g06560.1 7 Oryza sativa 1E-32 161 38 57 0 (0) _
Os12g04130.1 7 Oryza sativa 4E-22 169 33 46 0 (0) C
Zm00001eb213300_P001 agpv5 Zea mays 1E-54 182 49 65 0 (0) _
GRMZM2G028188_P01 3.21 Zea mays 1E-54 182 49 65 0 (0) _
v1_GRMZM2G028188_P01 4a53 Zea mays 1E-54 182 49 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FAM176(1) FANCL_C(1) PHD(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3H2C3(1) z
TargetP:	Cytoplasm (Class 4 C0.276; M0.283; S0.009; _0.533)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	197 aa (-cTP 144)
Molecular Weight	22.03 kDA(-cTP )
PI	5.94(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data