PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G06460.1 ubiquitin activating enzyme 2

Lab Annot.

ATUBA2; ubiquitin activating enzyme 2
Mapman: 29.5.11.2 protein.degradation.ubiquitin.E1

Curated Location

TAIR curated location: nucleus9076989

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G30110.1 11 Arabidopsis thaliana 0 1068 80 89 418 (209) _
AT2G21470.1 11 Arabidopsis thaliana 2E-30 188 39 54 14 (0) S
AT2G21470.3 11 Arabidopsis thaliana 2E-30 188 39 54 10 (0) S
Os11g01510.2 7 Oryza sativa 0 1008 78 89 53 (53) _
Os11g01510.1 7 Oryza sativa 0 1008 78 89 53 (53) _
Os11g01510.3 7 Oryza sativa 0 1008 78 89 53 (53) _
Zm00001eb404860_P001 agpv5 Zea mays 0 1008 79 90 0 (0) _
GRMZM2G057441_P01 3.21 Zea mays 0 1008 79 90 62 (51) _
v1_GRMZM2G057441_P01 4a53 Zea mays 0 1008 79 90 48 (47) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	E1_4HB(1) E1_FCCH(1) E1_UFD(2) Shikimate_DH(2) ThiF(2) UBA_e1_thiolCys(2)
TargetP:	Cytoplasm (Class 5 C0.444; M0.082; S0.066; _0.536)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1077 aa (-cTP 1022)
Molecular Weight	119.62 kDA(-cTP )
PI	5.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
337	Detail								bundle sheaths [A. thaliana]	Bundle sheath total BS strands	wild-type
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19888209(leaves)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data