PPDB

PPDB	The Plant Proteome Database

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AT5G06410.1 DNAJ heat shock N-terminal domain-containing protein

Lab Annot.

J-domain protein DjC17 (type 3) - mtHSCB (Fe-S assembly)
Mapman: 29.8.1* protein assembly and cofactor ligation.Fe-S assembly

Curated Location

mitochondria (Pubmed: 27655366 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os12g27070.1 7 Oryza sativa 4E-87 190 63 81 0 (0) M
v1_GRMZM2G157588_P01 4a53 Zea mays 1E-89 192 64 80 0 (0) M
Zm00001eb161520_P001 agpv5 Zea mays 1E-89 192 64 80 0 (0) M
GRMZM2G157588_P01 3.21 Zea mays 1E-89 192 64 80 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DnaJ(1) Endonuc-PvuII(1) HscB_4_cys(1) HSCB_C(2) NEMO(2) zinc_ribbon_15(1)
TargetP:	Chloroplast (Class 4 C0.626; M0.296; S0.008; _0.043)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	252 aa (-cTP 193)
Molecular Weight	28.93 kDA(-cTP 22.27)
PI	7.51(-cTP 5.17)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2004	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2007	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2028	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2318	Detail								leaf [A. thaliana]	PG plastoglobule
2319	Detail								leaf [A. thaliana]	PG plastoglobule
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data