PPDB

PPDB	The Plant Proteome Database

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AT5G06220.1 LETM1-like protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G06220.3 11 Arabidopsis thaliana 0 884 94 94 0 (0) M
AT5G06220.2 11 Arabidopsis thaliana 0 910 90 90 14 (14) M
AT3G11560.3 11 Arabidopsis thaliana 0 882 66 76 38 (38) C
Os08g37610.1 7 Oryza sativa 0 822 51 65 10 (10) _
Os08g37610.2 7 Oryza sativa 0 790 51 65 10 (10) _
Zm00001eb033410_P005 agpv5 Zea mays 0 823 49 65 0 (0) C
Zm00001eb033410_P003 agpv5 Zea mays 0 822 49 65 0 (0) M
Zm00001eb033410_P004 agpv5 Zea mays 0 823 49 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	LETM1(1) Msg2_C(1)
TargetP:	Mitochondria (Class 5 C0.426; M0.579; S0.019; _0.094)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	3 TMs
TAT position:
Length	832 aa (-cTP 752)
Molecular Weight	92.41 kDA(-cTP )
PI	5.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1125	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1126	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1127	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1936	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))
21515685(GreenCut2)

Comparative Proteomics Data