PPDB

PPDB	The Plant Proteome Database

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AT5G06210.1 RNA binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G27330.1 11 Arabidopsis thaliana 1E-24 101 41 65 0 (0) M
AT1G74230.1 11 Arabidopsis thaliana 6E-24 110 46 70 132 (109) M
AT3G23830.1 11 Arabidopsis thaliana 4E-21 86 46 69 1 (1) M
Os04g33810.1 7 Oryza sativa 5E-32 107 54 66 0 (0) M
Os03g17060.1 7 Oryza sativa 4E-23 83 51 71 0 (0) C
Os01g68790.2 7 Oryza sativa 4E-22 88 45 71 21 (21) C
v1_GRMZM2G113513_P01 4a53 Zea mays 8E-36 131 51 61 0 (0) M
GRMZM2G113513_P01 3.21 Zea mays 8E-36 131 51 61 0 (0) M
Zm00001eb083720_P001 agpv5 Zea mays 8E-36 131 51 61 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Nup35_RRM(1) Nup35_RRM_2(1) RRM_1(1) RRM_7(1) RRM_occluded(1) SET_assoc(1) Trans
TargetP:	Mitochondria (Class 4 C0.191; M0.578; S0.047; _0.031)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	146 aa (-cTP 84)
Molecular Weight	15.42 kDA(-cTP )
PI	9.23(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data