PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G05980.1 DHFS-FPGS homolog B

Lab Annot.

DHFS-FPGS homolog B
Mapman: 25.8 C1-metabolism.tetrahydrofolate synthase

Curated Location

plastid (Pubmed: 23198870 21233333 )

TAIR curated location: chloroplast stroma11752472

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G05980.2 11 Arabidopsis thaliana 0 513 100 100 12 (1) _
AT3G55630.3 11 Arabidopsis thaliana 0 509 60 74 4 (2) _
AT3G55630.2 11 Arabidopsis thaliana 0 509 60 74 4 (2) _
Os03g02030.1 7 Oryza sativa 0 508 61 76 0 (0) M
Os10g35940.1 7 Oryza sativa 0 529 57 70 0 (0) C
Os03g02030.2 7 Oryza sativa 0 492 59 75 0 (0) M
Zm00001eb404110_P002 agpv5 Zea mays 0 462 63 75 0 (0) _
Zm00001eb044170_P004 agpv5 Zea mays 0 475 58 73 0 (0) C
Zm00001eb044170_P005 agpv5 Zea mays 0 513 54 69 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Mur_ligase_C(1) Mur_ligase_M(1)
TargetP:	Mitochondria (Class 3 C0.120; M0.639; S0.053; _0.029)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	571 aa (-cTP 559)
Molecular Weight	63.34 kDA(-cTP )
PI	6.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2287	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data