PPDB

The Plant Proteome Database

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AT5G05970.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot.
Mapman: 27.1 RNA.processing; 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G05970.2 11Arabidopsis thaliana078299990 (0)_
AT2G43770.1 11Arabidopsis thaliana1E-0816031464 (2)C
AT2G47410.5 11Arabidopsis thaliana4E-0819228450 (0)_
Os09g09470.1 7Oryza sativa080651660 (0)_
Os09g09470.2 7Oryza sativa1E-17866948630 (0)_
Os03g23909.1 6Oryza sativa2E-0921328450 (0)_
Zm00001eb095480_P002 agpv5Zea mays081051670 (0)_
v1_GRMZM2G088261_P01 4a53Zea mays081051670 (0)_
GRMZM2G088261_P01 3.21Zea mays081051670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(3) NYD-SP28_assoc(1) WD40(6)
TargetP: Cytoplasm (Class 3 C0.217; M0.128; S0.058; _0.687)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 781 aa (-cTP 723)
Molecular Weight 84.63 kDA(-cTP )
PI 6.59(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help