PPDB

 The Plant Proteome Database

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AT5G05840.1   replication factor C subunit%2C putative (DUF620)
Lab Annot. unknown protein DUF620 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55720.1 11Arabidopsis thaliana2E-16643756720 (0)_
AT5G66740.1 11Arabidopsis thaliana2E-13939752680 (0)_
AT1G75160.1 11Arabidopsis thaliana3E-13140650640 (0)_
Os03g16060.1 7Oryza sativa3E-16544755700 (0)_
Os01g55795.1 7Oryza sativa1E-14540554680 (0)_
Os07g40150.1 7Oryza sativa5E-12232753720 (0)C
GRMZM2G007055_P04 3.21Zea mays5E-16346154690 (0)_
Zm00001eb011950_P001 agpv5Zea mays5E-16346154690 (0)_
v1_GRMZM2G007055_P01 4a53Zea mays5E-16346154690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF620(1)
TargetP: Cytoplasm (Class 3 C0.228; M0.090; S0.019; _0.781)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 439 aa (-cTP 392)
Molecular Weight 48.86 kDA(-cTP )
PI 5.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

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