PPDB

PPDB	The Plant Proteome Database

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AT5G05810.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G20030.1 11 Arabidopsis thaliana 7E-46 372 33 44 0 (0) S
AT4G28890.1 11 Arabidopsis thaliana 7E-44 307 36 50 0 (0) S
AT4G40070.1 11 Arabidopsis thaliana 3E-29 167 38 52 0 (0) M
Os06g48065.1 7 Oryza sativa 2E-75 385 43 54 0 (0) _
Os05g51780.1 7 Oryza sativa 3E-37 146 46 60 0 (0) S
Os09g29310.1 7 Oryza sativa 3E-27 153 37 52 0 (0) S
v1_GRMZM2G131822_P01 4a53 Zea mays 5E-74 371 42 53 0 (0) _
Zm00001eb226440_P001 agpv5 Zea mays 5E-74 371 42 53 0 (0) _
GRMZM2G131822_P01 3.21 Zea mays 5E-74 371 42 53 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(2) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3H2C3
TargetP:	Secreted (Class 2 C0.108; M0.004; S0.850; _0.022)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	407 aa (-cTP 346)
Molecular Weight	45.27 kDA(-cTP )
PI	9.29(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data