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PPDB	The Plant Proteome Database

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AT5G05670.1 signal recognition particle binding protein

Lab Annot.

signal recognition particle binding
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G05670.2 11 Arabidopsis thaliana 0 260 100 100 4 (4) _
AT2G18770.1 11 Arabidopsis thaliana 1E-154 261 83 93 7 (7) _
AT2G18770.2 11 Arabidopsis thaliana 2E-154 261 83 93 0 (0) _
Os08g41250.1 7 Oryza sativa 1E-105 249 59 80 25 (25) _
Os08g41250.2 7 Oryza sativa 1E-105 249 59 80 25 (25) _
Os06g27870.1 7 Oryza sativa 9E-74 171 61 76 0 (0) S
GRMZM2G015642_P01 3.21 Zea mays 1E-112 249 59 80 3 (3) _
Zm00001eb042120_P001 agpv5 Zea mays 1E-112 249 59 80 0 (0) _
v1_GRMZM2G015642_P01 4a53 Zea mays 1E-112 249 59 80 2 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_16(1) AAA_22(1) AAA_7(2) Arf(1) ATP_bind_1(2) cobW(3) FeoB_N(1) G-alpha(2) G
TargetP:	Cytoplasm (Class 2 C0.162; M0.061; S0.011; _0.951)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	260 aa (-cTP 211)
Molecular Weight	29.08 kDA(-cTP )
PI	7.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
19200160(flower-stage 12)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)

Comparative Proteomics Data