PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G05630.1   Amino acid permease family protein

Lab Annot. Amino acid permease protein
Mapman: 34.3 transport.amino acids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G31830.1 11Arabidopsis thaliana048769840 (0)_
AT1G31830.2 11Arabidopsis thaliana046371870 (0)_
AT1G31820.1 11Arabidopsis thaliana044368830 (0)_
Os03g37984.2 7Oryza sativa047664800 (0)_
Os02g47210.1 7Oryza sativa049063780 (0)M
Os03g37984.1 7Oryza sativa047664800 (0)C
Zm00001eb251690_P002 agpv5Zea mays045168830 (0)_
GRMZM2G078292_P01 3.21Zea mays044168850 (0)M
Zm00001eb415450_P002 agpv5Zea mays044168850 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AA_permease(1) AA_permease_2(1)
TargetP: Chloroplast (Class 3 C0.802; M0.046; S0.125; _0.324)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 12 TMs
Aramemnon: 11 TMs
TAT position:
Length 490 aa (-cTP 447) (-lTP 405)
Molecular Weight 53.69 kDA(-cTP 49.29)(-lTP 44.83)
PI 9.21(-cTP 9.37)(-lTP 9.356)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help