PPDB

 The Plant Proteome Database

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AT5G05620.1   gamma-tubulin complex protein 2
Lab Annot. gamma-tubulin complex protein 2
Mapman: 31.1 cell.organisation
Curated Location
TAIR curated location: mitochondrion & cell wall & microtubule & cytoplasm14671022,15469496,16603653
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61650.1 11Arabidopsis thaliana047498999 (9)_
AT5G44340.1 11Arabidopsis thaliana9E-884383558788 (499)_
AT4G20890.1 11Arabidopsis thaliana8E-874383558589 (359)_
Os05g06450.2 7Oryza sativa047391956 (6)_
Os05g06450.1 7Oryza sativa047391956 (6)_
Os03g01530.1 7Oryza sativa8E-87438355838 (38)_
Zm00001eb282650_P001 agpv5Zea mays047391950 (0)_
Zm00001eb282650_P002 agpv5Zea mays047391950 (0)_
GRMZM2G085970_P01 3.21Zea mays0473919528 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DSPn(1) Misat_Tub_SegII(1) Tubulin(1) Tubulin_2(1) Tubulin_C(1)
TargetP: Cytoplasm (Class 3 C0.059; M0.259; S0.141; _0.792)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 474 aa (-cTP 467)
Molecular Weight 53.28 kDA(-cTP )
PI 5.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2297Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help