PPDB

 The Plant Proteome Database

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AT5G05590.1   phosphoribosylanthranilate isomerase 2
Lab Annot. phosphoribosylanthranilate isomerase 2 (PAI2)
Mapman: 35.1 not assigned.no ontology
Curated Location plastid stroma (Pubmed: 23198870 )

TAIR curated location: chloroplast7890741
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07780.1 11Arabidopsis thaliana02759910024 (18)C
AT1G07780.2 11Arabidopsis thaliana02759910024 (18)C
AT1G07780.12 11Arabidopsis thaliana0275991000 (0)C
Os02g16630.2 7Oryza sativa4E-9222759770 (0)_
Os02g16630.1 7Oryza sativa8E-9222759770 (0)C
Zm00001eb203980_P003 agpv5Zea mays6E-9225156730 (0)M
Zm00001eb203980_P001 agpv5Zea mays6E-9225156730 (0)M
v1_GRMZM2G152984_P01 4a53Zea mays6E-9225156735 (5)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PRAI(1)
TargetP: Chloroplast (Class 2 C0.829; M0.116; S0.019; _0.200)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 275 aa (-cTP 243) (-lTP 193)
Molecular Weight 29.62 kDA(-cTP 26.18)(-lTP 20.75)
PI 8.63(-cTP 7.85)(-lTP 6.225)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
420Detail       leaf [A. thaliana] chloroplast stromaclpR1-stop (EMS)
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
1292Detail       leaf [A. thaliana] co-IP cGEP (rep. 1) stromawild-type
1294Detail       leaf [A. thaliana] co-IP cGEP (rep. 2) stromawild-type
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1870Detail       Total leaf [A. thaliana] Stroma wild-type
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2034Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2115Detail       leaf [A. thaliana] Stroma stromacGep
2116Detail       leaf [A. thaliana] Stroma stromacGep
2287Detail        [A. thaliana] Clp C1 WT
2291Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2307Detail        [A. thaliana] Clp C1 TRAP
2319Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 20423899(chloroplast)
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help