PPDB

The Plant Proteome Database

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AT5G05560.1   E3 ubiquitin ligase

Lab Annot. E3 ubiquitin ligase, putative
Mapman: 29.5.11.4.4 protein.degradation.ubiquitin.E3.APC
Curated Location
TAIR curated location: ubiquitin ligase complex & cytoplasm10398714,11019805
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G05560.2 11Arabidopsis thaliana0180794940 (0)_
AT5G05560.3 11Arabidopsis thaliana0168093940 (0)C
Zm00001eb286110_P002 agpv5Zea mays0178849660 (0)M
Zm00001eb286110_P003 agpv5Zea mays0151453700 (0)M
Zm00001eb286110_P001 agpv5Zea mays072157730 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC1(1) APC1_C(2) PC_rep(3)
TargetP: Cytoplasm (Class 4 C0.009; M0.441; S0.180; _0.730)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 4 TMs
TAT position:
Length 1711 aa (-cTP 1689)
Molecular Weight 189.83 kDA(-cTP )
PI 6.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help