PPDB

PPDB	The Plant Proteome Database

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AT5G05550.1 sequence-specific DNA binding transcription factor

Lab Annot.

sequence-specific DNA binding transcription factors
Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G05550.3 11 Arabidopsis thaliana 0 245 99 100 0 (0) _
AT5G05550.2 11 Arabidopsis thaliana 0 242 100 100 0 (0) _
AT3G11100.1 11 Arabidopsis thaliana 1E-108 250 72 82 0 (0) _
Os01g48320.1 7 Oryza sativa 6E-35 97 59 79 0 (0) _
Os05g48690.2 7 Oryza sativa 3E-33 101 59 71 0 (0) C
Os05g48690.1 7 Oryza sativa 3E-33 101 59 71 0 (0) C
Zm00001eb157080_P002 agpv5 Zea mays 5E-51 289 38 52 0 (0) _
Zm00001eb157080_P003 agpv5 Zea mays 5E-51 289 38 52 0 (0) _
Zm00001eb157080_P001 agpv5 Zea mays 5E-51 289 38 52 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF573(1) MADF_DNA_bdg(2) Myb_DNA-bind_3(1) Myb_DNA-bind_4(1) Myb_DNA-bind_6(1)
TargetP:	Cytoplasm (Class 3 C0.222; M0.208; S0.062; _0.747)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	246 aa (-cTP 171)
Molecular Weight	28.19 kDA(-cTP )
PI	8.67(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data