PPDB

PPDB	The Plant Proteome Database

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AT5G05450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH18)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G71370.1 11 Arabidopsis thaliana 0 566 73 84 0 (0) _
AT1G71280.1 11 Arabidopsis thaliana 3E-160 352 67 76 0 (0) _
AT1G71280.2 11 Arabidopsis thaliana 6E-158 386 62 71 0 (0) _
Os01g07080.1 7 Oryza sativa 0 581 64 79 0 (0) C
Os01g07080.2 7 Oryza sativa 0 492 67 82 0 (0) C
Os03g58810.1 7 Oryza sativa 5E-78 477 34 53 0 (0) C
GRMZM2G303752_P03 3.21 Zea mays 0 586 62 78 0 (0) _
Zm00001eb123450_P002 agpv5 Zea mays 0 586 62 78 0 (0) _
Zm00001eb123450_P001 agpv5 Zea mays 0 618 59 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) DUF4217(1) GramPos_pilinD1(1) Helicase_C(1) Mem_trans(2) ResIII(1)
TargetP:	Cytoplasm (Class 1 C0.082; M0.075; S0.055; _0.929)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	593 aa (-cTP 534)
Molecular Weight	66.94 kDA(-cTP )
PI	8.88(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data