PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G05350.1 PLAC8 family protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G10980.1 11 Arabidopsis thaliana 0 541 69 79 0 (0) _
AT1G11380.1 11 Arabidopsis thaliana 6E-08 132 31 46 0 (0) _
Os05g39730.1 7 Oryza sativa 0 488 58 70 0 (0) _
Os03g18790.1 7 Oryza sativa 1E-120 468 42 55 0 (0) M
Os01g61060.1 7 Oryza sativa 8E-116 360 48 62 0 (0) _
GRMZM2G034019_P01 3.21 Zea mays 0 482 58 71 0 (0) _
Zm00001eb351970_P002 agpv5 Zea mays 0 482 58 71 0 (0) _
Zm00001eb351970_P001 agpv5 Zea mays 0 482 58 71 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CitMHS(1) DUF2985(1) Folate_carrier(2) GST_C_2(1) MscS_TM(2) PLAC8(1)
TargetP:	Chloroplast (Class 4 C0.788; M0.031; S0.008; _0.524)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	6 TMs
Aramemnon:	7 TMs
TAT position:
Length	526 aa (-cTP 451)
Molecular Weight	59.68 kDA(-cTP 51.26)
PI	8.14(-cTP 7.40)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1612	Detail								Natural Senescence leaf [A. thaliana]	chloroplast fractionation thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data