PPDB

PPDB	The Plant Proteome Database

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AT5G05230.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G40640.1 11 Arabidopsis thaliana 7E-71 354 40 56 0 (0) M
AT2G40640.2 11 Arabidopsis thaliana 1E-54 315 38 53 0 (0) M
AT3G19895.1 11 Arabidopsis thaliana 8E-40 174 40 65 0 (0) C
Os03g60140.1 7 Oryza sativa 5E-69 209 57 68 0 (0) C
Os02g58280.1 7 Oryza sativa 4E-33 211 34 50 0 (0) M
v1_GRMZM2G160304_P02 4a53 Zea mays 3E-65 210 53 67 0 (0) _
GRMZM2G160304_P02 3.21 Zea mays 3E-65 210 53 67 0 (0) _
v1_GRMZM2G160304_P09 4a53 Zea mays 7E-64 210 53 67 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	U-box(1) zf-C3HC4_3(1) zf-RING_5(1) zf-RING_UBOX(1)
TargetP:	Cytoplasm (Class 2 C0.102; M0.118; S0.119; _0.722)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	363 aa (-cTP 349)
Molecular Weight	39.37 kDA(-cTP )
PI	5.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data