PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G05150.1   autophagy-related protein 18E

Lab Annot. ATG18e - (ATG9/2/18 complex)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56440.1 11Arabidopsis thaliana4E-12736450690 (0)_
AT2G40810.1 11Arabidopsis thaliana2E-12639547660 (0)_
AT2G40810.2 11Arabidopsis thaliana2E-12639547660 (0)_
Os01g07400.2 7Oryza sativa2E-12540746650 (0)C
Os01g07400.1 7Oryza sativa2E-12540746650 (0)C
Os05g07710.3 7Oryza sativa6E-10036442610 (0)_
Zm00001eb336470_P002 agpv5Zea mays4E-12640847650 (0)_
v1_GRMZM2G143211_P01 4a53Zea mays4E-12640847650 (0)_
GRMZM2G143211_P01 3.21Zea mays4E-12640847650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) WD40(2)
TargetP: Cytoplasm (Class 3 C0.143; M0.166; S0.025; _0.719)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 374 aa (-cTP 306)
Molecular Weight 41.67 kDA(-cTP )
PI 8.63(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help