PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G05130.1 DNA/RNA helicase protein

Lab Annot.

Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G22750.1 11 Arabidopsis thaliana 2E-130 702 36 54 0 (0) _
AT5G43530.1 11 Arabidopsis thaliana 2E-118 678 35 53 0 (0) _
AT1G11100.5 11 Arabidopsis thaliana 5E-105 743 32 48 0 (0) C
Os07g44800.1 7 Oryza sativa 0 849 53 68 0 (0) _
Os02g32570.1 7 Oryza sativa 1E-122 706 34 53 0 (0) _
Os04g09800.1 7 Oryza sativa 5E-116 693 34 51 0 (0) _
Zm00001eb329060_P004 agpv5 Zea mays 0 671 52 68 0 (0) _
GRMZM2G148249_P02 3.21 Zea mays 0 567 53 69 0 (0) _
v1_GRMZM2G148249_P02 4a53 Zea mays 0 567 53 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_34(1) DEAD(1) DUF1644(2) DZR_2(1) Helicase_C(1) HIRAN(1) Prok-RING_4(1) ResI
TargetP:	Mitochondria (Class 1 C0.124; M0.925; S0.011; _0.025)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	881 aa (-cTP 849)
Molecular Weight	98.62 kDA(-cTP )
PI	8.90(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data