PPDB

The Plant Proteome Database

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AT5G05120.1   C2H2 and C2HC zinc fingers superfamily protein

Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G24625.1 11Arabidopsis thaliana2E-098239530 (0)_
AT5G14010.1 11Arabidopsis thaliana5E-093953740 (0)C
AT1G80730.1 11Arabidopsis thaliana2E-086636590 (0)_
Os09g26100.1 7Oryza sativa3E-084252690 (0)_
Os03g13600.2 7Oryza sativa6E-083357780 (0)C
Os03g13600.1 7Oryza sativa6E-083357780 (0)C
GRMZM2G082686_P01 3.21Zea mays7E-106942530 (0)_
v1_GRMZM2G082686_P01 4a53Zea mays7E-106942530 (0)_
Zm00001eb051750_P001 agpv5Zea mays2E-096942530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PyrI_C(1) zf-C2H2(1) zf-C2H2_4(1) zf-C2H2_6(1) zf-H2C2_2(1)
TargetP: Cytoplasm (Class 2 C0.187; M0.065; S0.120; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 201 aa (-cTP 188)
Molecular Weight 22.45 kDA(-cTP )
PI 5.04(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help