PPDB

PPDB	The Plant Proteome Database

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AT5G04960.1 Plant invertase/pectin methylesterase inhibitor superfamily

Lab Annot.

Mapman: 10.8.1 cell wall.pectin*esterases.PME

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G10710.1 11 Arabidopsis thaliana 0 574 68 79 0 (0) _
AT1G53840.1 11 Arabidopsis thaliana 1E-158 582 44 63 3 (3) _
AT3G14300.1 11 Arabidopsis thaliana 2E-136 574 42 58 0 (0) _
Os09g26360.1 7 Oryza sativa 1E-134 613 39 53 0 (0) _
Os07g49100.1 7 Oryza sativa 1E-130 515 42 58 0 (0) S
Os04g38560.1 7 Oryza sativa 2E-129 531 40 58 0 (0) S
GRMZM2G125356_P01 3.21 Zea mays 2E-135 513 43 59 8 (8) S
Zm00001eb424030_P001 agpv5 Zea mays 2E-135 513 43 59 0 (0) S
v1_GRMZM2G125356_P01 4a53 Zea mays 2E-135 513 43 59 7 (3) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3357(1) Pectate_lyase(1) Pectate_lyase_3(1) Pectinesterase(1) PMEI(1)
TargetP:	Cytoplasm (Class 4 C0.188; M0.368; S0.010; _0.731)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	564 aa (-cTP 525)
Molecular Weight	62.17 kDA(-cTP )
PI	8.94(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)

Comparative Proteomics Data