PPDB

PPDB	The Plant Proteome Database

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AT5G04950.1 nicotianamine synthase 1

Lab Annot.

Mapman: 15.2 metal handling.binding, chelation and storage

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G56080.1 11 Arabidopsis thaliana 0 327 83 91 0 (0) _
AT1G09240.1 11 Arabidopsis thaliana 3E-149 321 65 79 0 (0) _
AT1G56430.1 11 Arabidopsis thaliana 3E-142 318 61 79 1 (1) _
Os07g48980.1 7 Oryza sativa 2E-100 323 47 66 0 (0) _
Os03g19420.2 7 Oryza sativa 8E-91 328 47 60 0 (0) _
Os03g19427.1 7 Oryza sativa 1E-89 284 50 63 0 (0) _
v1_GRMZM2G385200_P01 4a53 Zea mays 2E-97 304 50 66 0 (0) _
GRMZM2G034956_P01 3.21 Zea mays 2E-97 304 50 66 0 (0) _
GRMZM2G385200_P01 3.21 Zea mays 2E-97 304 50 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CheR(1) Methyltransf_12(1) Methyltransf_23(1) Methyltransf_24(1) Methyltransf_25
TargetP:	Cytoplasm (Class 4 C0.158; M0.092; S0.186; _0.567)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	320 aa (-cTP 266)
Molecular Weight	35.55 kDA(-cTP )
PI	6.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data