PPDB

PPDB	The Plant Proteome Database

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AT5G04940.1 SU(VAR)3-9 homolog 1

Lab Annot.

Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family

Curated Location

TAIR curated location: nucleus

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G04940.2 11 Arabidopsis thaliana 0 670 100 100 1 (0) _
AT1G73100.1 11 Arabidopsis thaliana 0 688 57 70 3 (1) _
AT2G24740.1 11 Arabidopsis thaliana 2E-167 565 47 63 0 (0) _
Os05g41172.1 7 Oryza sativa 0 677 45 62 13 (13) _
Os05g41172.2 7 Oryza sativa 0 677 45 62 13 (13) _
Os11g38900.1 7 Oryza sativa 0 521 54 69 12 (12) _
Zm00001eb291310_P001 agpv5 Zea mays 0 668 46 61 0 (0) C
GRMZM2G117458_P03 3.21 Zea mays 0 668 46 61 1 (1) C
GRMZM2G117458_P02 3.21 Zea mays 0 668 46 61 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Pre-SET(1) SAD_SRA(1) SET(1)
TargetP:	Cytoplasm (Class 3 C0.047; M0.437; S0.007; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	670 aa (-cTP 633)
Molecular Weight	74.47 kDA(-cTP )
PI	8.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data