PPDB

PPDB	The Plant Proteome Database

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AT5G04860.1 splicing factor 3A subunit

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G04860.2 11 Arabidopsis thaliana 0 631 100 100 0 (0) C
AT3G11760.1 11 Arabidopsis thaliana 0 766 45 59 0 (0) M
AT2G10560.1 11 Arabidopsis thaliana 9E-179 278 91 95 0 (0) _
Os03g44670.1 7 Oryza sativa 0 777 44 60 0 (0) M
Os12g42570.1 7 Oryza sativa 0 755 45 61 0 (0) M
Os01g09770.1 7 Oryza sativa 1E-75 319 46 59 0 (0) S
GRMZM2G146616_P01 3.21 Zea mays 0 756 45 61 0 (0) M
v1_GRMZM2G146616_P01 4a53 Zea mays 0 756 45 61 0 (0) M
Zm00001eb053010_P001 agpv5 Zea mays 0 756 45 61 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BSMAP(1) NT-C2(1)
TargetP:	Mitochondria (Class 5 C0.008; M0.493; S0.405; _0.158)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	782 aa (-cTP 721)
Molecular Weight	88.27 kDA(-cTP )
PI	5.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data