PPDB

PPDB	The Plant Proteome Database

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AT5G04850.1 SNF7 family protein

Lab Annot.

Mapman: 27.3.71 RNA.regulation of transcription.SNF7

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G04850.2 11 Arabidopsis thaliana 2E-165 272 86 86 0 (0) _
AT3G10640.1 11 Arabidopsis thaliana 2E-152 235 86 94 0 (0) _
AT3G10640.2 11 Arabidopsis thaliana 2E-108 170 89 94 0 (0) M
Os05g01250.1 7 Oryza sativa 7E-135 235 78 92 0 (0) _
Os01g01350.1 7 Oryza sativa 2E-115 235 70 87 0 (0) _
Os01g01350.2 7 Oryza sativa 5E-70 155 72 84 0 (0) _
GRMZM2G092468_P01 3.21 Zea mays 2E-128 234 75 90 0 (0) _
Zm00001eb267590_P001 agpv5 Zea mays 2E-128 234 75 90 0 (0) _
v1_GRMZM2G092468_P01 4a53 Zea mays 2E-128 234 75 90 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5856(1) HIP1_clath_bdg(3) Prefoldin(2) Snf7(1)
TargetP:	Cytoplasm (Class 2 C0.162; M0.148; S0.092; _0.802)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	235 aa (-cTP 208)
Molecular Weight	26.24 kDA(-cTP )
PI	4.70(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data