PPDB

The Plant Proteome Database

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AT5G04830.1   Nuclear transport factor 2 (NTF2) family protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G04830.2 11Arabidopsis thaliana6E-13417810010013 (8)_
Os01g73500.1 7Oryza sativa8E-8316270820 (0)S
Os01g73500.2 7Oryza sativa9E-6316259690 (0)S
GRMZM2G167758_P01 3.21Zea mays2E-8115369844 (3)_
v1_GRMZM2G167758_P01 4a53Zea mays2E-8115369843 (3)_
Zm00001eb362380_P001 agpv5Zea mays2E-8115369840 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2358(1) SnoaL(1) SnoaL_2(1)
TargetP: Cytoplasm (Class 2 C0.124; M0.126; S0.074; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 178 aa (-cTP 173)
Molecular Weight 20.29 kDA(-cTP )
PI 8.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20061580(chloroplast envelope (inner+outer))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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