PPDB

PPDB	The Plant Proteome Database

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AT5G04780.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 34.99 transport.misc

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G24000.1 11 Arabidopsis thaliana 1E-155 577 37 62 0 (0) M
AT4G02750.1 11 Arabidopsis thaliana 2E-155 541 41 65 0 (0) M
AT1G68930.2 11 Arabidopsis thaliana 6E-154 600 38 58 0 (0) _
Os12g06070.1 7 Oryza sativa 0 572 54 72 0 (0) M
Os10g30760.1 7 Oryza sativa 3E-166 572 41 64 0 (0) M
Os09g07780.1 7 Oryza sativa 2E-161 583 41 61 0 (0) M
Zm00001eb406960_P003 agpv5 Zea mays 7E-169 452 50 71 0 (0) S
v1_GRMZM2G163396_P01 4a53 Zea mays 4E-160 588 40 62 0 (0) M
Zm00001eb183560_P001 agpv5 Zea mays 4E-160 588 40 62 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(2) Coatomer_E(2) DYW_deaminase(1) PPR(10) PPR_1(7) PPR_2(8) PPR_3(6) PPR_
TargetP:	Chloroplast (Class 3 C0.807; M0.249; S0.034; _0.019)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	635 aa (-cTP 594)
Molecular Weight	71.72 kDA(-cTP 67.11)
PI	7.92(-cTP 6.69)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
19995723(chloroplast reference proteome)

Comparative Proteomics Data