PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G04620.1 biotin F

Lab Annot.

7-keto-8-aminopelargonic acid (KAPA) synthase (BIOF)
Mapman: 18.6 Co-factor and vitamine metabolism.biotin

Curated Location

cytosol (Pubmed: 16299174 )

TAIR curated location: cytosol16299174

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G04620.2 11 Arabidopsis thaliana 0 343 100 100 0 (0) _
AT5G04620.3 11 Arabidopsis thaliana 0 279 99 100 0 (0) _
AT5G23670.1 11 Arabidopsis thaliana 5E-28 342 27 47 0 (0) S
Os01g53450.2 7 Oryza sativa 7E-177 336 67 84 0 (0) _
Os10g41150.1 7 Oryza sativa 9E-176 326 69 85 0 (0) M
Os01g53450.1 7 Oryza sativa 1E-175 336 67 84 0 (0) M
GRMZM2G110932_P03 3.21 Zea mays 4E-178 326 69 85 0 (0) _
v1_GRMZM2G110932_P03 4a53 Zea mays 4E-178 326 69 85 0 (0) _
Zm00001eb434390_P002 agpv5 Zea mays 4E-178 326 69 85 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Aminotran_1_2(1) Aminotran_5(1) Beta_elim_lyase(1) Cys_Met_Meta_PP(1)
TargetP:	Cytoplasm (Class 2 C0.017; M0.228; S0.067; _0.844)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	343 aa (-cTP 287)
Molecular Weight	37.31 kDA(-cTP )
PI	9.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data