PPDB

PPDB	The Plant Proteome Database

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AT5G04420.1 Galactose oxidase/kelch repeat superfamily protein

Lab Annot.

kelch repeat-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G04420.3 11 Arabidopsis thaliana 0 514 100 100 2 (2) _
AT5G04420.2 11 Arabidopsis thaliana 0 514 100 100 2 (2) _
AT3G05420.1 11 Arabidopsis thaliana 2E-151 503 45 64 20 (13) _
Os02g57690.1 7 Oryza sativa 6E-172 505 52 70 0 (0) _
Os02g57690.2 7 Oryza sativa 6E-172 505 52 70 0 (0) _
Os03g61930.3 7 Oryza sativa 8E-157 492 46 65 3 (3) _
v1_GRMZM2G085547_P03 4a53 Zea mays 2E-157 506 49 67 2 (2) _
v1_GRMZM2G085547_P01 4a53 Zea mays 2E-157 506 49 67 2 (2) _
GRMZM2G085547_P03 3.21 Zea mays 2E-157 506 49 67 3 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_13(1) ABC_tran_CTD(2) APG6_N(2) Atg14(1) CALCOCO1(1) CENP-F_leu_zip(1) Cep57
TargetP:	Cytoplasm (Class 2 C0.144; M0.075; S0.061; _0.913)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	514 aa (-cTP 483)
Molecular Weight	56.66 kDA(-cTP )
PI	5.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
2316	Detail								leaf [A. thaliana]	PG plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data