PPDB

The Plant Proteome Database

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AT5G04290.1   kow domain-containing transcription factor 1

Lab Annot. kow domain-containing transcription factor 1
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G04290.2 11Arabidopsis thaliana0149398980 (0)_
AT4G08350.1 11Arabidopsis thaliana2E-56305405915 (11)_
AT2G34210.2 11Arabidopsis thaliana1E-5328641600 (0)_
Os05g43060.1 7Oryza sativa3E-13872037550 (0)C
Os02g53230.1 7Oryza sativa6E-5530839580 (0)_
Os06g10620.1 7Oryza sativa6E-2414242596 (6)_
Zm00001eb352910_P001 agpv5Zea mays1E-15788138540 (0)C
Zm00001eb292250_P001 agpv5Zea mays2E-15781938550 (0)_
v1_GRMZM2G375222_P01 4a53Zea mays1E-13988137512 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: KOW(3) Spt5-NGN(1) Spt5_N(1)
TargetP: Cytoplasm (Class 2 C0.169; M0.181; S0.068; _0.805)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1493 aa (-cTP 1459)
Molecular Weight 158.04 kDA(-cTP )
PI 5.53(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19995728(proplastid (Brassica napus))
19888209(80S polysomal fraction)
22060019(phosphoproteome - N-starved seedlings)
20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help