PPDB

PPDB	The Plant Proteome Database

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AT5G04210.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein

Lab Annot.

CCCH-type zinc fingerfamily
Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G29580.1 11 Arabidopsis thaliana 2E-31 143 48 62 0 (0) _
AT1G07360.1 11 Arabidopsis thaliana 2E-30 161 43 59 1 (1) _
AT5G07060.1 11 Arabidopsis thaliana 5E-17 175 31 48 0 (0) _
Os06g07350.1 7 Oryza sativa 2E-27 143 44 61 2 (2) _
Os07g18050.1 7 Oryza sativa 2E-27 143 44 62 2 (2) _
Zm00001eb375430_P004 agpv5 Zea mays 3E-27 143 43 61 0 (0) M
Zm00001eb375430_P001 agpv5 Zea mays 2E-26 143 43 61 0 (0) _
GRMZM5G831993_P01 3.21 Zea mays 2E-26 143 43 61 3 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4651(1) Nup35_RRM_2(1) RRM_1(1) zf-CCCH(3) zf-CCCH_2(2) zf_CCCH_4(2)
TargetP:	Cytoplasm (Class 3 C0.085; M0.175; S0.070; _0.771)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	193 aa (-cTP 174)
Molecular Weight	21.58 kDA(-cTP )
PI	8.12(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data