PPDB

The Plant Proteome Database

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AT5G04150.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G04150.2 11Arabidopsis thaliana4E-176238991000 (0)_
AT3G56970.1 11Arabidopsis thaliana2E-4525841590 (0)_
AT3G56980.1 11Arabidopsis thaliana2E-3526339580 (0)_
Os01g72370.2 7Oryza sativa6E-3015741610 (0)_
Os01g72370.1 7Oryza sativa6E-3015741610 (0)_
Os01g72370.3 7Oryza sativa6E-2815741610 (0)_
Zm00001eb140680_P001 agpv5Zea mays1E-2915840630 (0)_
GRMZM2G057413_P02 3.21Zea mays1E-2915840630 (0)_
v1_GRMZM2G057413_P01 4a53Zea mays1E-2915840630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1) IL2(1)
TargetP: Cytoplasm (Class 3 C0.138; M0.173; S0.017; _0.689)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 260 aa (-cTP 214)
Molecular Weight 30.03 kDA(-cTP )
PI 9.63(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help