PPDB

The Plant Proteome Database

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AT5G03970.1   F-box associated ubiquitination effector family protein

Lab Annot. F-box associated ubiquitination effector protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G03970.2 11Arabidopsis thaliana04061001000 (0)_
AT5G07610.1 11Arabidopsis thaliana1E-1134024420 (0)C
Os10g10410.1 7Oryza sativa6E-1030324420 (0)M
Os10g06700.1 7Oryza sativa1E-0928125400 (0)C
Os02g41910.1 7Oryza sativa9E-0715325460 (0)_
v1_GRMZM2G163801_P01 4a53Zea mays1E-1329423410 (0)_
GRMZM2G163801_P01 3.21Zea mays1E-1329423410 (0)_
Zm00001eb202740_P001 agpv5Zea mays2E-1329622410 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1)
TargetP: Cytoplasm (Class 2 C0.027; M0.096; S0.114; _0.793)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 418 aa (-cTP 414)
Molecular Weight 47.95 kDA(-cTP )
PI 8.61(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help