PPDB

PPDB	The Plant Proteome Database

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AT5G03910.1 ABC2 homolog 12

Lab Annot.

ABC transporter protein
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems

Curated Location

envelope (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G28010.1 11 Arabidopsis thaliana 9E-66 576 32 52 0 (0) _
AT1G27940.1 11 Arabidopsis thaliana 1E-63 565 31 53 0 (0) _
AT3G28360.1 11 Arabidopsis thaliana 2E-62 604 29 49 0 (0) _
Os04g33700.1 7 Oryza sativa 0 612 48 65 0 (0) _
Os01g50160.1 7 Oryza sativa 3E-64 539 32 50 0 (0) _
Os08g05690.1 7 Oryza sativa 2E-63 481 34 53 0 (0) _
Zm00001eb083810_P004 agpv5 Zea mays 0 612 48 67 0 (0) M
Zm00001eb083810_P001 agpv5 Zea mays 0 594 48 66 0 (0) M
Zm00001eb083810_P003 agpv5 Zea mays 1E-171 532 47 65 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_25(1) AAA_28(1) AAA_29(1) AAA
TargetP:	Chloroplast (Class 3 C0.734; M0.272; S0.002; _0.035)
Predotar:
Subcel. Location:	Thylakoid membrane
TM-HMM prediction:	2 TMs
Aramemnon:	6 TMs
TAT position:
Length	634 aa (-cTP 583) (-lTP 526)
Molecular Weight	69.20 kDA(-cTP 63.44)(-lTP 57.39)
PI	9.05(-cTP 8.39)(-lTP 7.813)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1983	Detail								leaf [A. thaliana]	plastid	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)
18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21693672(wound-regulated leaf proteome (wt))

Comparative Proteomics Data