PPDB

PPDB	The Plant Proteome Database

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AT5G03680.1 Duplicated homeodomain-like superfamily protein

Lab Annot.

Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family

Curated Location

TAIR curated location: nucleus15269176

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G10000.1 11 Arabidopsis thaliana 3E-138 427 55 64 0 (0) _
AT3G10000.2 11 Arabidopsis thaliana 8E-128 427 52 62 0 (0) _
AT1G76880.1 11 Arabidopsis thaliana 6E-59 449 35 55 0 (0) _
Os03g02240.1 7 Oryza sativa 8E-47 293 37 54 15 (15) C
Os02g43300.1 7 Oryza sativa 2E-41 403 32 51 0 (0) _
Os10g37240.4 7 Oryza sativa 2E-35 104 61 79 3 (3) _
Zm00001eb043580_P001 agpv5 Zea mays 1E-50 285 37 55 0 (0) _
Zm00001eb043580_P002 agpv5 Zea mays 4E-50 285 37 55 0 (0) _
Zm00001eb220250_P002 agpv5 Zea mays 8E-50 282 36 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Dehydrin(1) MADF_DNA_bdg(2) Myb_DNA-bind_4(2) Myb_DNA-bind_5(2) Myb_DNA-bind_6(3
TargetP:	Cytoplasm (Class 2 C0.157; M0.098; S0.014; _0.805)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	591 aa (-cTP 512)
Molecular Weight	66.64 kDA(-cTP )
PI	6.62(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data