PPDB

The Plant Proteome Database

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AT5G03660.1   transcriptional activator (DUF662)

Lab Annot. Family of unknown function (DUF662)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G03660.3 11Arabidopsis thaliana2E-101149991000 (0)_
AT5G03660.2 11Arabidopsis thaliana1E-8717387872 (1)_
AT3G09980.1 11Arabidopsis thaliana7E-80172798710 (9)C
Os04g33450.2 7Oryza sativa2E-5313066821 (1)_
Os04g33450.1 7Oryza sativa1E-4411067831 (1)_
Os02g32650.1 7Oryza sativa4E-3813458760 (0)_
GRMZM2G147390_P01 3.21Zea mays8E-5013063800 (0)_
Zm00001eb421850_P002 agpv5Zea mays8E-5013063800 (0)_
v1_GRMZM2G147390_P01 4a53Zea mays8E-5013063800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Atg14(1) CASP_C(2) CENP-H(2) Coatamer_beta_C(1) DAGAT(1) DUF1664(2) DUF3584(1) D
TargetP: Cytoplasm (Class 5 C0.494; M0.162; S0.041; _0.516)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 173 aa (-cTP 144)
Molecular Weight 20.19 kDA(-cTP )
PI 5.63(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1875Detail       Total leaf [A. thaliana] total soluble wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help