PPDB

The Plant Proteome Database

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AT5G03580.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36660.1 11Arabidopsis thaliana2E-138042630 (0)C
AT1G22760.1 11Arabidopsis thaliana2E-128239625 (5)_
AT4G34110.1 11Arabidopsis thaliana1E-11863659345 (138)_
Os03g17030.1 7Oryza sativa1E-148641620 (0)S
Os08g22354.1 7Oryza sativa1E-1184386134 (34)_
Os08g22354.2 7Oryza sativa1E-1184386134 (34)S
GRMZM2G412075_P01 3.21Zea mays7E-148340620 (0)C
v1_GRMZM2G412075_P01 4a53Zea mays7E-148340620 (0)C
Zm00001eb397530_P001 agpv5Zea mays7E-148340620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup35_RRM(1) RRM_1(1) RRM_5(1) RRM_occluded(1)
TargetP: Cytoplasm (Class 2 C0.046; M0.129; S0.182; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 101 aa (-cTP 56)
Molecular Weight 11.31 kDA(-cTP )
PI 5.61(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help