PPDB

 The Plant Proteome Database

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AT5G03530.1   RAB GTPase homolog C2A
Lab Annot. ATRAB ALPHA (Rab GTPase homolog C2a); GTP binding
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G03530.2 11Arabidopsis thaliana3E-1542101001000 (0)S
AT3G09910.1 11Arabidopsis thaliana2E-11521081900 (0)S
AT3G09910.2 11Arabidopsis thaliana2E-11521081900 (0)S
Os03g05280.1 7Oryza sativa2E-11020974860 (0)S
Os10g31830.1 7Oryza sativa9E-10720672860 (0)_
Os02g43690.1 6Oryza sativa5E-55202486219 (19)S
GRMZM5G836471_P05 3.21Zea mays8E-110203698313 (13)_
Zm00001eb434560_P001 agpv5Zea mays8E-11020369830 (0)_
GRMZM5G809265_P01 3.21Zea mays6E-10820374871 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_16(1) AAA_29(1) AAA_7(1) ABC_tran(1) Arf(1) DUF815(2) FeoB_N(1) GTP_EFTU(2)
TargetP: Secreted (Class 5 C0.100; M0.054; S0.673; _0.554)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 210 aa (-cTP 158)
Molecular Weight 23.31 kDA(-cTP )
PI 6.00(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help