PPDB

The Plant Proteome Database

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AT5G03480.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G03495.1 11Arabidopsis thaliana1E-6719457730 (0)_
AT5G53700.1 11Arabidopsis thaliana4E-4520346610 (0)_
AT5G53700.2 11Arabidopsis thaliana3E-2014642520 (0)_
Os04g52960.1 7Oryza sativa3E-1488376823 (23)_
Os08g09350.1 7Oryza sativa1E-138542688 (8)_
GRMZM2G001850_P01 3.21Zea mays2E-158837676 (6)_
Zm00001eb046260_P002 agpv5Zea mays1E-138240690 (0)C
Zm00001eb046260_P003 agpv5Zea mays2E-138240690 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup35_RRM(3) Nup35_RRM_2(3) RRM_1(3)
TargetP: Cytoplasm (Class 2 C0.152; M0.116; S0.032; _0.894)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 321 aa (-cTP 293)
Molecular Weight 35.80 kDA(-cTP )
PI 5.76(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help