PPDB

PPDB	The Plant Proteome Database

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AT5G03450.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Transducin/WD40 repeat-like protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G03750.1 11 Arabidopsis thaliana 6E-21 125 52 62 0 (0) _
Os10g39850.1 7 Oryza sativa 6E-97 545 36 54 0 (0) _
Os03g01790.1 7 Oryza sativa 5E-85 512 34 52 0 (0) M
Os11g45430.1 7 Oryza sativa 5E-11 65 40 63 0 (0) _
GRMZM2G085691_P01 3.21 Zea mays 6E-89 520 34 54 0 (0) _
Zm00001eb000650_P001 agpv5 Zea mays 6E-89 520 34 54 0 (0) _
GRMZM2G085691_P02 3.21 Zea mays 2E-88 520 34 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PHtD_u1(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3
TargetP:	Mitochondria (Class 5 C0.023; M0.696; S0.040; _0.594)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	630 aa (-cTP 626)
Molecular Weight	69.87 kDA(-cTP )
PI	5.47(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data