PPDB

The Plant Proteome Database

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AT5G03420.1   5'-AMP-activated protein kinase-like protein

Lab Annot. PROTEIN TARGETING TO STARCH 3 (PTST3)
Mapman: 2.1.2 major CHO metabolism.synthesis.starch
Curated Location plastid (Pubmed: 29866647 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27070.1 11Arabidopsis thaliana9E-1613935530 (0)C
AT5G39790.1 11Arabidopsis thaliana7E-118638591 (1)M
AT5G39790.3 11Arabidopsis thaliana8E-118638590 (0)M
Os03g48170.1 7Oryza sativa2E-1613935560 (0)C
Os02g04330.2 7Oryza sativa1E-098638540 (0)_
Os02g04330.1 7Oryza sativa1E-098638540 (0)_
Zm00001eb053230_P003 agpv5Zea mays1E-1415033510 (0)C
Zm00001eb053230_P004 agpv5Zea mays1E-1415033510 (0)C
GRMZM2G104501_P01 3.21Zea mays1E-1415033511 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AMPK1_CBM(1) CBM53(1) Filament(1)
TargetP: Chloroplast (Class 5 C0.306; M0.038; S0.075; _0.170)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 598 aa (-cTP 551)
Molecular Weight 66.57 kDA(-cTP 61.00)
PI 4.58(-cTP 4.48)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1196Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1634Detail       leaf [A. thaliana] Stroma stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help