PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G03390.1   hypothetical protein (DUF295)

Lab Annot. unknown function (DUF295)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G68960.1 11Arabidopsis thaliana4E-7837045590 (0)M
AT5G53790.1 11Arabidopsis thaliana1E-4637931490 (0)_
AT1G05540.1 11Arabidopsis thaliana2E-4637434500 (0)M
Os06g35090.1 7Oryza sativa6E-0825124410 (0)_
Os11g38140.1 7Oryza sativa5E-0722024400 (0)S
Os11g38130.1 7Oryza sativa4E-0622024400 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF295(1)
TargetP: Mitochondria (Class 2 C0.086; M0.778; S0.062; _0.059)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 373 aa (-cTP 329)
Molecular Weight 42.14 kDA(-cTP )
PI 8.72(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(seedling)
18431481(chloroplast)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help