PPDB

 The Plant Proteome Database

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AT5G03360.1   cysteine/histidine-rich C1 domain protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G26380.1 11Arabidopsis thaliana098276860 (0)_
AT4G02540.1 11Arabidopsis thaliana083854680 (0)_
AT5G48320.1 11Arabidopsis thaliana0100648620 (0)_
Os09g31980.1 7Oryza sativa3E-0913435440 (0)_
Os07g41930.1 7Oryza sativa4E-0814531370 (0)M
Os08g31250.1 7Oryza sativa9E-0812326420 (0)_
Zm00001eb102060_P001 agpv5Zea mays6E-1417630420 (0)_
AC230021.2_FGP002 3.21Zea mays6E-1417630420 (0)_
v1_AC230021.2_FGP002 4a53Zea mays6E-1417630420 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: C1_2(8) PHD(7) PIN_6(1) Zn_ribbon_17(6)
TargetP: Cytoplasm (Class 5 C0.221; M0.053; S0.104; _0.370)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1015 aa (-cTP 996)
Molecular Weight 116.19 kDA(-cTP )
PI 6.06(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help