PPDB

The Plant Proteome Database

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AT5G03180.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G03180.2 11Arabidopsis thaliana046698990 (0)_
AT5G03180.4 11Arabidopsis thaliana043198990 (0)M
AT5G03180.5 11Arabidopsis thaliana039996970 (0)_
Os06g46366.1 7Oryza sativa2E-9342140590 (0)_
Os02g06920.2 7Oryza sativa1E-9240340600 (0)C
Os02g06920.1 7Oryza sativa1E-9240340600 (0)C
Zm00001eb224730_P001 agpv5Zea mays9E-9545440570 (0)_
GRMZM2G000753_P01 3.21Zea mays9E-9545440570 (0)_
v1_GRMZM2G000753_P01 4a53Zea mays9E-9545440570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MFS_1(1) RINGv(1) TraQ(1) zf-RING_11(1) zf-RING_2(1)
TargetP: Cytoplasm (Class 1 C0.048; M0.078; S0.004; _0.960)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 462 aa (-cTP 459)
Molecular Weight 52.24 kDA(-cTP )
PI 8.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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