PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G03040.1 IQ-domain 2

Lab Annot.

IQD2 (IQ-domain 2); calmodulin binding
Mapman: 30.3 signalling.calcium

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G03040.2 11 Arabidopsis thaliana 0 461 100 100 14 (11) C
AT5G03040.3 11 Arabidopsis thaliana 0 461 100 100 14 (11) C
AT3G09710.1 11 Arabidopsis thaliana 5E-160 466 60 69 0 (0) _
Os05g03190.1 7 Oryza sativa 2E-115 479 50 61 22 (22) _
Os01g61720.8 7 Oryza sativa 2E-79 364 46 62 0 (0) C
Os01g61720.6 7 Oryza sativa 2E-79 364 46 62 0 (0) C
Zm00001eb265430_P005 agpv5 Zea mays 9E-100 501 46 58 0 (0) C
Zm00001eb265430_P001 agpv5 Zea mays 9E-100 501 46 58 0 (0) C
v1_GRMZM2G051141_P06 4a53 Zea mays 9E-100 501 46 58 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4005(3) IQ(2)
TargetP:	Chloroplast (Class 3 C0.552; M0.074; S0.005; _0.152)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	461 aa (-cTP 417)
Molecular Weight	50.46 kDA(-cTP 45.66)
PI	10.64(-cTP 10.66)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1122	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
1126	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1494	Detail								leaf [A. thaliana]
1576	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1577	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data