PPDB

PPDB	The Plant Proteome Database

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AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G02860.5 11 Arabidopsis thaliana 0 819 100 100 0 (0) C
AT5G02860.3 11 Arabidopsis thaliana 0 819 100 100 0 (0) C
AT5G02860.4 11 Arabidopsis thaliana 0 819 100 100 0 (0) C
Os05g19380.1 7 Oryza sativa 2E-178 671 38 61 16 (16) C
Os10g35240.1 7 Oryza sativa 8E-81 591 28 48 0 (0) M
Os10g35240.2 7 Oryza sativa 8E-81 591 28 48 0 (0) M
GRMZM2G092739_P01 3.21 Zea mays 0 642 55 74 12 (12) C
Zm00001eb326320_P001 agpv5 Zea mays 0 642 55 74 0 (0) C
Zm00001eb326320_P002 agpv5 Zea mays 0 642 55 74 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(3) ATP13(7) BTAD(2) Clathrin(4) DUF1884(4) ECSIT(6) Exog_C(3) Glyco_trans_4
TargetP:	Chloroplast (Class 4 C0.565; M0.081; S0.008; _0.338)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	819 aa (-cTP 753)
Molecular Weight	92.08 kDA(-cTP 84.79)
PI	7.79(-cTP 7.78)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data