PPDB

PPDB	The Plant Proteome Database

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AT5G02840.1 LHY/CCA1-like 1

Lab Annot.

CCA1 and LHY
Mapman: 27.3.26 RNA.regulation of transcription.MYB-related transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G02840.2 11 Arabidopsis thaliana 0 293 100 100 0 (0) _
AT5G02840.3 11 Arabidopsis thaliana 0 282 98 99 0 (0) _
AT5G02840.5 11 Arabidopsis thaliana 0 258 99 100 0 (0) _
Os02g45670.1 7 Oryza sativa 7E-87 248 57 66 0 (0) _
Os06g45840.2 7 Oryza sativa 1E-84 258 52 65 0 (0) _
Os06g45840.1 7 Oryza sativa 4E-84 259 52 66 0 (0) _
Zm00001eb274210_P001 agpv5 Zea mays 3E-87 243 55 68 0 (0) _
GRMZM2G057408_P01 3.21 Zea mays 7E-87 243 55 68 0 (0) _
Zm00001eb274210_P003 agpv5 Zea mays 7E-87 243 55 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Myb_DNA-bind_6(1) Myb_DNA-bind_7(1) Myb_DNA-binding(1)
TargetP:	Cytoplasm (Class 2 C0.220; M0.058; S0.147; _0.839)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	293 aa (-cTP 285)
Molecular Weight	32.21 kDA(-cTP )
PI	5.25(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data